Acanthocystis amura Zlatogursky, Gerasimova, Plotnikov, 2016
Acanthocystis antonkomolovi Leonov, 2010
Acanthocystis astrakhanensis Mikrjukov, 1993
Acanthocystis bicornis Dürrschmidt, 1987
Acanthocystis clavata Dürrschmidt, 1987
Acanthocystis cornuta Dürrschmidt, 1987
Acanthocystis costata Zlatogursky, 2014
Acanthocystis crescenta Zlatogursky, 2010
Acanthocystis dentata Leonov et Mylnikov 2012
Acanthocystis elenazhivotovae Leonov, 2010
Acanthocystis lyra Gerasimova et Plotnikov, 2016
Acanthocystis mikrjukovi Leonov, 2010
Acanthocystis mylnikovi Leonov, 2010
Acanthocystis myriospina Penard, 1890, emend. Nicholls, 1983
Acanthocystis nichollsi Siemensma et Roijackers, 1988
Acanthocystis olgashelestae Leonov, 2010
Acanthocystis pectinata Penard, 1889, emend. Siemensma & Roijackers, 1988
Acanthocystis penardi Wailes, 1925
Acanthocystis polymorpha Dürrschmidt, 1985
Acanthocystis quadrifurca Nicholls, 1983
Acanthocystis saphonovi Mikrjukov, 1994
Acanthocystis siemensmae Gerasimova et Plotnikov, 2016
Acanthocystis spinifera Greeff, 1869 sensu Siemensma et Roijackers, 1988
Acanthocystis takahashii Dürrschmidt, 1987
Acanthocystis taurica Mikrjukov, 1997
Acanthocystis tubata Dürrschmidt, 1987
Acanthocystis turfacea Carter 1863
Acanthocystis valdiviense Dürrschmidt, 1987
Acanthocystis wiasemskii Ostroumoff, 1917
Amastigomonas caudata Zhukov, 1975
Ancoracysta twista Janouškovec, Tikhonenkov, Burki, Howe, Rohwer, Mylnikov et Keeling 2017
Ancyromonas contorta Klebs, 1892
Ancyromonas sigmoides Kent, 1880
Apusomonas proboscidea Alexeieff, 1924
Chlamydaster laciniatus Rainer, 1968
Chlamydaster sterni Rainer, 1968
Choanocystis aculeata (Hertwig et Lesser, 1874) Siemensma et Roijackers, 1988
Choanocystis antarctica Tikhonenkov et Mylnikov, 2010
Choanocystis bicornioides Mikrjukov, 1995
Choanocystis ebelii (Wujek et Elsner, 1992) Mikrjukov, 1997
Choanocystis kareliensis Mikrjukov, 1994
Choanocystis lepidula (Penard, 1904) Siemensma et Roijackers, 1988
Choanocystis malyutini Mikrjukov, 1995
Choanocystis minima Zlatogursky, 2010
Choanocystis pelagica (Ostenfeld, 1904) Mikrjukov, 1994
Choanocystis perpussila (Petersen et Hensen, 1960) Siemensma, 1991
Choanocystis rhytidos (Dürrschmidt, 1987) Siemensma, 1991
Choanocystis rossica Mikrjukov, 1995
Choanocystis rotoairense (Dürrschmidt, 1987) Mikrjukov, 1995
Choanocystis rotundata (Nicholls, 1983) Dürrschmidt, 1987
Choanocystis symna Zlatogursky, 2014
Collodictyon triciliatum Carter, 1865
Cryptomonas ovata Ehrenberg, 1832
Goniomonas truncata (Fresenius 1858)
Gweamonas unicus Lee, 2002
Heterophrys marina Hertwig et Lesser, 1874, emend. Mikrjukov, 1996
Heterophrys minutus (Walton, 1905) comb. n. Mikrjukov, 2001
Heterophrys myriopoda Archer, 1869
Heterophrys simplex (Shaudinn, 1897) Siemensma, 1991
Heteroraphidiophrys australis Mikrjukov et Patterson 2002
Kathablepharis remigera (Vørs, 1992) Clay et Kugrens, 1999
Kiitoksia ystava Vørs, 1992
Manchomonas bermudensis (Molina, Nerad, 1992) Cavalier-Smith et Chao, 2010
Multimonas marina (Mylnikov, 1989) Cavalier-Smith in Cavalier-Smith et Chao, 2010
Oxnerella maritima Dobell, 1917
Parasphaerastrum marina (Ostenfeld, 1904) Mikrjukov, 1996
Pendulomonas adriperis Tong, 1997
Planomonas cephalopora (Larsen et Patterson, 1990) Cavalier-Smith in Cavalier-Smith et al., 2008
Planomonas melba (Patterson et Simpson, 1996) Cavalier-Smith in Cavalier-Smith et al., 2008
Platychilomonas psammobia Larsen et Patterson, 1990
Podomonas magna Cavalier-Smith in Cavalier-Smith et Chao, 2010
Polyplacocystis ambigua (Penard 1904) Mikrjukov 1996
Polyplacocystis arborescens (Mikrjukov, 1994) Mikrjukov, 2001
Polyplacocystis bruni (Penard, 1903) Mikrjukov, 1999
Polyplacocystis coerulea (Penard 1904) Mikrjukov et Croome 1998
Polyplacocystis pallida (Schulze, 1874) Mikrjukov, 1996
Polyplacocystis symmetrica (Penard, 1904) Mikrjukov, 1996
Pseudoraphidiophrys discoidea (Dürrschmidt, 1985) Mikrjukov, 1997
Pseudoraphidiophrys formosa (Dürrschmidt, 1985)
Pseudoraphidiophrys formosa (Dürrschmidt, 1985) Mikrjukov, 1997
Pseudoraphidiophrys ovata (Dürrschmidt, 1987) Mikrjukov, 1997
Pseudoraphidiophrys veliformis (Dürrschmidt, 1987) Mikrjukov, 1997
Pseudoraphidocystis flabellata (Dürrschmidt, 1987) Mikrjukov, 1997
Pseudoraphidocystis glutinosa (Penard, 1904) Mikrjukov, 1997
Pseudoraphidocystis umbraculiformis (Dürrschmidt, 1987) Mikrjukov, 1977
Pterocystis anapoda Siemensma et Roijackers, 1988
Pterocystis discoidea (Dürrschmidt, 1985)
Pterocystis foliacea (Dürrschmidt, 1985) Siemensma, 1991
Pterocystis paliformis (Dürrschmidt, 1987) Siemensma 1991
Pterocystis pinnata (Nicholls, 1983) Siemensma et Roijackers, 1988
Pterocystis plumosa (Dürrschmidt, 1987) Siemensma 1991
Pterocystis pterocantha (Siemensma, 1981) Siemensma et Roijackers, 1988
Pterocystis pulchra (Dürrschmidt, 1985) Siemensma 1991
Pterocystis pyriformis Dürrschmidt, 1987
Pterocystis pyriformis (Dürrschmidt, 1987) Siemensma 1991
Pterocystis striata (Ncholls, 1983) Dürrschmidt, 1987
Pterocystis tropica (Dürrschmidt, 1987) Siemensma 1991
Quadricilia rotundata (Skuja, 1948) Vørs, 1992
Raineriophrys echinata Rainer, 1968
Raineriophrys erinaceoides (Petersen and Hansen 1960) Mikrjukov 2001
Raineriophrys fortesca (Nicholls, 1983)
Raineriophrys fortesca Nicholls, 1983
Raineriophrys kilianii Dürrschmidt, 1987
Raineriophrys latimarginalis Dürrschmidt, 1987 comb. n.
Raineriophrys pteromorphos (Dürrschmidt, 1987)
Raineriophrys pteromorphos Dürrschmidt, 1987
Raineriophrys raineri Siemensma et Roijackers, 1988 comb. n.
Raineriophrys scaposa Dürrschmidt, 1987
Raphidiophrys capitata Siemensma et Roijackers, 1988
Raphidiophrys elegans Hertwig et Lesser, 1874
Raphidiophrys heterophryoidea Zlatogursky, 2012
Raphidiophrys intermedia Penard, 1904
Raphidiophrys minuta Nicholls et Dürrschmidt, 1985
Raphidiophrys ovalis (Nicholls et Dürrschmidt, 1985) Siemensma et Roijackers, 1988
Raphidiophrys viridis Archer, 1867
Raphidocystis glabra Nicholls et Dürrschmidt, 1985
Raphidocystis lemani (Penard, 1891) Penard, 1904
Raphidocystis tubifera Penard, 1904
Sphaerastrum fockii (Archer, 1869) West 1901
Spironema terricola Foissner et Foissner, 1993
Thecamonas muscula Mylnikov, 1999
Zoelucasa sablensis Nicholls, 2012
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